Long, D., and Saha, R., “The Green Machine: Bacterial strain design for kids” College of Engineering Graduate Symposium, Keynote, February 26th, 2021.
Alsiyabi, A., Brown, B., Immethun, C., and Saha R., “Harnessing sunlight to convert CO2 into biodegradable plastic” College of Engineering Graduate Symposium, February 26th, 2021
Brown, B. and Saha, R., “Conversion of Lignin into Biodegradable Plastic by Rhodopseudomonas palustris CGA009,” Proceedings of World Biomaterials Congress, Dec 11-15, 2020.
Brown, B.. and Saha, R., “Conversion of Lignin into Biodegradable Plastic by Rhodopseudomonas palustris CGA009,” Proceedings of World Biomaterials Congress, Dec 11-15, 2020.
Brown, B.. and Saha, R., “Conversion of Lignin into Bioplastic by Rhodopseudomonas palustris,” Proceedings of ASABE International Meeting, Jul 13-15, 2020.
[People’s choice Award winner] Islam, M. M., “Metabolic Modeling and Analysis of Microbes, Plants, and Microbial Ecosystems: Discovery and Redesign”, College of Engineering Graduate Research Symposium, University of Nebraska-Lincoln, February 21, 2020.
Islam, M. M., Schroeder, W., Fernando, S. C., and Saha, R., “Microbiome-Virome Interactions in Bovine Rumen: Elucidating Metabolic Transactions Through Mathematical Modeling “, 255th ACS National Meeting and Exposition, New Orleans, Louisiana, March 18-22, 2018
Saha, R., “Plant Metabolic Models: From Model Building to ‘Omics Data Integration and Answering Important Biological Questions”, Nebraska Research and Innovation Conference on Predictive Crop Design: Genome to Phenome, Lincoln, NE, April 6-7, 2017.
Saha, R., “Modeling of Metabolism: From Individual Microorganisms to Plant and Microbial Community”, UNL Plant Science Retreat, Nebraska City, NE, October 14-15, 2016.
Saha, R., Berla, B.M., Mueller, T.J., Welkie, D.J., Sherman, L., Pakrasi, H.B. and Maranas, C.D., “Comparative genome-scale modeling of the metabolic potential of cyanobacteria Cyanothece sp. ATCC 51142 and Synechocystis sp. PCC6803”, 11th workshop on cyanobacteria, St. Louis, MO, Aug 7-11, 2013.
Saha, R., Berla, B.M., Mueller, T.J., Elvitigala, T., Page, L.E., Pakrasi, H.B. and Maranas, C.D., “Contrasting the metabolic capabilities of cyanobacterial species for assessing bio-production platform selection”, ACS annual meeting, San Diego, CA, Mar 25-29, 2012.
Saha, R., Park, W, Lee, D.Y. and Karimi, D.Y., “Comparison on web-based simulation tools of biochemical and cellular model in systems biology”, International conference on modeling in chemical and biological engineering sciences, Bangkok, Oct 25-27, 2006.
Poster Presentations
Chowdhury, N., Schroeder, W., Zhang, D., Simons, M., Hirel, B., Cahoon, E., Maranas, C., and Saha, R., “Stress Response Study of Zea mays by Incorporating Omics Information into its Genome-Scale Metabolic Model”, COnstraint-Based Reconstruction and Analysis (COBRA) Conference, virtual, March 1-2, 2021.
Islam, M. M., Thomas, V. C., and Saha, R., “Optimization-Based Analysis of Comparative Metabolomic Data Identifies Regulatory Mechanisms in Staphylococcus Aureus Mutants”, COnstraint-Based Reconstruction and Analysis (COBRA) Conference, virtual, March 1-2, 2021.
Alsiyabi, A., Brown, B., Immethun, C., and Saha R., “Metabolic Modeling and Fluorometry Elucidate the Interplay between Electron Sources and Sinks in a Purple Non-Sulfur Bacterium”, COnstraint-Based Reconstruction and Analysis (COBRA) Conference, virtual, March 1-2, 2021.
Chowdhury, N., and Saha, R., “Stress Response Study of Zea mays by Incorporating Omics Information into its Genome-Scale Metabolic Model”, College of Engineering Graduate Research Symposium, University of Nebraska-Lincoln, February 26, 2021.
Brown, B., and Saha, R., “Hydrogen Biofuel Production from a Versatile Bacterium Using Agricultural Waste.”, 3in 5 pitch competition, College of Engineering Graduate Research Symposium, University of Nebraska-Lincoln, February 26, 2021.
Kathol, M.,Immethun, C., and Saha, R., “Investigating the relaxase behavior and replication functionality of the mobilization protein mobV in the plasmid pBBR1”, 3in 5 pitch competition, College of Engineering Graduate Research Symposium, University of Nebraska-Lincoln, February 26, 2021.
Islam, M. M., “Optimization in Biological Systems: The Legacy of Engineering Complex Processes”, College of Engineering Graduate Research Symposium, University of Nebraska-Lincoln, February 26, 2021
Schroeder, W. L., Harris, S. D., and Saha, R., “Computation-driven mechanistic understanding of the cellular cost and role of defensive pigment production in a polyextremotolerant fungus”. Poster Presentation. Engineering Graduate Student Symposium, Lincoln, NE, USA. Feb. 21, 2020.
Islam, M. M., Sandhu, J., Walia, H, and Saha, R., “MiReN: An Optimization Tool for Data-Driven Discovery of Global Regulatory Phenomena During Heat Stress in Rice Seed”, Midwest Big Data hub (MBDH) All-hands meeting, Chicago, IL, October 29-30, 2019
Immethun, C., Changa, T., and Saha, R., “Engineering a purple non-sulfur bacterium to expand symbiotic nitrogen fixation”, Plant Science Symposium, Lincoln, NE, October 17-18, 2019
[First Place prize winner] Islam, M. M., Sandhu, J., Walia, H, and Saha, R., “MiReN: An Optimization Tool for Data-Driven Discovery of Global Regulatory Phenomena During Heat Stress in Rice Seed”, UNL Plant Sciences Symposium, Nebraska Innovation Campus, March 12, 2019
Islam, M. M., Fernando, S. C., and Saha, R., “Virome modulate metabolic shiftws in the rumen microbiome: computational predictions based on genome-scale Metabolic Modeling”, 19th Annual Symposium in Virology, University of Nebraska-Lincoln, Lincoln, NE, September 6, 2019
Islam, M. M., Sandhu, J., Walia, H, and Saha, R., “MiReN: An Optimization Tool for Data-Driven Discovery of Global Regulatory Phenomena Used to Elucidate the Heat Stress Response Mechanism in Rice Seed”, COnstraint-Based Reconstruction and Analysis (COBRA) Conference, Seattle, WA, October 14-16, 2018
O’Neil, J., Al-Siyabi, A., and Saha, R., “Maximization of Succinic Acid Production on A. succinogenes via Genome-scale Metabolic Modeling”, UNL summer Research Fair, Lincoln, NE, 2018
Daggumati, S. R., Le, T., Islam, M. M., and Saha, R., “Utilizing Methane-Oxidizing Microbes to Mitigate Trichloroethylene in Soil and Groundwater”, UNL summer Research Fair, Lincoln, NE, 2018
Maaliao, C., Islam, M. M., and Saha, R., “Understanding Stress Response Mechanism in Rice Seed”, UNL summer Research Fair, Lincoln, NE, 2018
Islam, M. M., Thomas, V. C., and Saha, R., “Towards Data-driven Discovery of Novel Therapeutic Targets through Metabolic Modeling of Staphylococcus aureus”, UNL Spring Research Fair, Lincoln, NE, April 10, 2018
Saha, R., “Implementing Peer Instruction in a Flipped Class: Perspectives from Chemical Engineering Computation”, Summer School for Chemical Engineering Faculty, American Society for Engineering Education (ASEE), North Carolina State University, Raleigh, NC, July 29-August 3 2017.
Le, T., Daggumati, S. R., Islam, M. M., and Saha, R., “Constructing a Genome-Scale Metabolic Modle for Methylobacter tundripaludum“, Fall Research Fair 2017, University of Nebraska-Lincoln, Lincoln, NE, August 9, 2017.
[Best Poster Award winner] Buchanan, K., Schroeder, W., Islam, M. M., and Saha, R., “Computational Modeling of Actinobacillus succinogenes to Optimize Production of Succinic Acid”, Fall Research Fair 2017, University of Nebraska-Lincoln, Lincoln, NE, August 9, 2017.
Islam, M. M., Saha, R., “Modeling of metabolsim: From Individual Microorganism to Whole-Plant and Multi-species Consortia”, UNL Plant Science Retreat, Nebraska City, NE, October 14-15, 2016.
Yu, J., Saha, R., Berla, B.M., Mueller, T.J., Kumar, A., Simons, M., Khodayari, A., Whitney Hollinshead, W., Abernathy, M., He, L., Tang, Y.J., Maranas, C.D., Pakrasi, H.B., “Systems Level Study of a Novel Fast-Growing Cyanobacterial Strain for Next- Generation Biofuel Production”, DOE genomic sciences meeting, Tysons, VA, Feb 22-25, 2015.
Saha, R., Simons, M., Kumar, A., Guillard, L., Hirel, B and Maranas, C.D., “Assessing the Metabolic Impact of Nitrogen Availability using a Compartmentalized Maize Leaf Genome-Scale Model”, 3rd COBRA meeting, Winter Green, VA, May 20-23, 2014.
Saha, R., Simons, M., Islam, M.M., Zomorrodi, A.R., Hirel, B and Maranas, C.D., “Metabolic modeling of multi tissue and multi organism systems”, DOE genomic sciences meeting, Crystal City, VA, Feb 10-12, 2014.
Saha, R., Mueller, T.J., Berla, B.M., Pakrasi, B.M. and Marans, C.D., “Construction of metabolic models for a family of cyanobacteria”, DOE genomic sciences meeting, Bethesda, MD, Feb 24-27, 2013.
Saha, R., Berla, B.M., Mueller, T.J., Elvitigala, T., Page, L.E., Pakrasi, H.B. and Maranas, C.D., “Contrasting the metabolic capabilities of Cyanothece sp. ATCC 51142 and Synechocystis sp. PCC6803”, DOE genomic sciences meeting, Bethesda, MD, Feb 26-29, 2012.
Saha, R., Suthers, P.F. and Maranas, C.D., “Zea mays iRS1563: A Comprehensive Genome-Scale Metabolic Reconstruction of Maize Metabolism”, DOE genomic sciences meeting, Crystal City, VA, Apr 10-13, 2011.
Saha, R., Suresh, S., Park, W., Lee, D.Y. and Karimi, I.A., “Microbial fuel cell in perspective of strain improvement and mediator selection”, Joint third AOHUPO and fourth structural biology and functional genomics conference, Singapore, Dec 4-7, 2006.
Saha, R., Park, W, Lee., D.Y. and Karimi, D.Y., “Comparison on web-based simulation tools of biochemical and cellular model in systems biology”, Annual graduate students’ symposium, NUS, Singapore, Sep 24, 2006.
